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biotender-max/ai-bio-conference-papers

Analysis updated 2026-05-18

17PythonAudience · researcherLicenseSetup · easy

TLDR

A curated dataset of 3,722 AI-and-biology research papers from ICLR, ICML, and NeurIPS (2010-2026), browsable by year and topic tag.

Mindmap

mindmap
  root((ai-bio-conference-papers))
    What it is
      Dataset not software
      3722 papers 2010 to 2026
      ICLR ICML NeurIPS
    Data format
      JSON and CSV master files
      Per year markdown browsing
      Ten topic tags
    Methodology
      Two stage keyword filter
      Hand reviewed accuracy check
    Use cases
      Research trend analysis
      Topic browsing
      Load into Python scripts

Code map

Detail Auto

An interactive map of this repo's files and how they connect — its source is parsed live in your browser. Click Visualize to build it.

filefunction / class

What do people build with it?

USE CASE 1

Browse AI-and-biology papers from a specific conference and year without searching each proceedings site separately

USE CASE 2

Load the dataset into a Python script to analyze trends in AI biology research topics over time

USE CASE 3

Find papers tagged with a specific topic, like protein modeling or single cell analysis

USE CASE 4

Track how research volume in a subfield, such as protein structure prediction, has grown since 2021

What is it built with?

PythonJSONCSVMarkdown

How does it compare?

biotender-max/ai-bio-conference-papers0petru/sentimoagi-eval-official/forte
Stars171717
LanguagePythonPythonPython
Setup difficultyeasymoderatehard
Complexity3/54/5
Audienceresearcherdeveloperdeveloper

Figures from each repo's GitHub metadata at analysis time.

How do you get it running?

Difficulty · easy Time to first run · 5min

No installation needed, clone the repo and load the JSON or browse the markdown files directly.

In plain English

This repository is a curated dataset, not a piece of software you run. It collects 3,722 research papers at the intersection of artificial intelligence and biology that were accepted at three major AI conferences, ICLR, ICML, and NeurIPS, spanning from 2010 through 2026. Each paper entry includes its title, authors, abstract, and a link to the PDF. The papers were found using a two stage keyword filter built to catch biology related work across a huge pool of AI conference papers, and the README states this filter was checked against a smaller, hand reviewed set of 315 papers and correctly found about 96 percent of them. Every paper is tagged with one or more of ten topic labels, such as protein, molecule, single cell, clinical, and neuro, based on which biology keywords appear in its abstract. The data is provided in a few different forms: a master JSON and CSV file containing every paper record, and a set of markdown files organized by conference and year that you can browse directly on GitHub, where each paper appears as a collapsible entry you click to expand and read the full abstract. A table in the README lets you jump straight to the file for any specific venue and year, along with the paper count for that year. The README also includes charts showing how the number of papers and specific topics, like protein related research, have grown over time, especially picking up noticeably after 2021. The intended use is for researchers, students, or anyone curious about trends in AI applied to biology to browse, search, or load this dataset into their own analysis scripts, since it can be loaded directly as JSON in a couple lines of Python. The data is released under a combination of the MIT license and CC-BY-4.0.

Copy-paste prompts

Prompt 1
Show me how to load papers_master.json from this repo in Python and filter papers tagged protein.
Prompt 2
Explain how the keyword filter and its accuracy against the hand-reviewed set works in this repo.
Prompt 3
Help me find all NeurIPS papers from 2023 in this dataset that are tagged clinical.
Prompt 4
Summarize what the topic trajectory charts in this repo show about biology research trends since 2017.

Frequently asked questions

What is ai-bio-conference-papers?

A curated dataset of 3,722 AI-and-biology research papers from ICLR, ICML, and NeurIPS (2010-2026), browsable by year and topic tag.

What language is ai-bio-conference-papers written in?

Mainly Python. The stack also includes Python, JSON, CSV.

How hard is ai-bio-conference-papers to set up?

Setup difficulty is rated easy, with roughly 5min to a first successful run.

Who is ai-bio-conference-papers for?

Mainly researcher.

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